publication

There is a growing recognition of marine microenvironments’ roles as reservoirs of biodiversity, sites of enhanced biological activity and in facilitating biological interactions. Here, we examine the bacterial community inhabiting free-living and particle-associated seawater microenvironments at the Pivers Island Coastal Observatory (PICO). 16S rRNA gene libraries from monthly samples (July […]

Foraging theory predicts the evolution of feeding behaviors that increase consumer fitness. Sponges were among the earliest metazoans on earth and developed a unique filter-feeding mechanism that does not rely on a nervous system. Once thought indiscriminate, sponges are now known to selectively consume picoplankton, but it is unclear whether […]

Diel regulation of hydrogen peroxide defenses by open ocean microbial communities Hydrogen peroxide (HOOH) is omnipresent in natural waters. Given that sunlight is the primary source of HOOH, we investigated the relationship between time of day and microbial HOOH degradation. Genes encoding HOOH-degrading enzymes were significantly more abundant during the […]

The distribution of major clades of Prochlorococcus tracks light, temperature and other environmental variables; yet, the drivers of genomic diversity within these ecotypes and the net effect on biodiversity of the larger community are poorly understood. We examined high light (HL) adapted Prochlorococcus communities across spatial and temporal environmental gradients […]

This work contributes new knowledge about the distributions of the marine cyanobacterium Prochlorococcus. Specifically, it is the first to compare basin-scale latitudinal transects for the Atlantic and Pacific Oceans; it is the first to show that the ratios of the dominant lineages (ecotypes) vary as a log-linear function with temperature; […]

Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world’s oceans. It is a simultaneous global mega-sequencing campaign aiming to generate the largest standardized microbial data set in a single […]

Theoretical studies predict that competition for limited resources reduces biodiversity to the point of ecological instability, whereas strong predator/prey interactions enhance the number of coexisting species and limit fluctuations in abundances. In open ocean ecosystems, competition for low availability of essential nutrients results in relatively few abundant microbial species. The […]

The global nature of ocean acidification (OA) transcends habitats, ecosystems, regions, and science disciplines. The scientific community recognizes that the biggest challenge in improving understanding of how changing OA conditions affect ecosystems, and associated consequences for human society, requires integration of experimental, observational, and modeling approaches from many disciplines over […]

We present the results from sustained tonne-quantity production of two novel strains of marine microalgae, the diatom Staurosira and the chlorophyte Desmodesmus, cultivated in a hybrid system of 25-m3 photobioreactors and 400-m2 open ponds at a large-scale demonstration facility, and then apply those results to evaluate the performance of a […]

  Time series studies have shown that some bacterial taxa occur only at specific times of the year while others are ubiquitous in spite of seasonal shifts in environmental variables. Here, we ask if these ubiquitous clades are generalists that grow over a wide range of environmental conditions, or clusters […]