Clark Lab
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    • James S Clark
  • Projects
    • Forecasting community dynamics: the mast system
      • Mast data in the network
      • Camera trap sampling
      • Remote sensing canopy condition and habitat
      • You can contribute
    • mastif network
      • Site hosts
      • Collaborators
      • Species in the mastif network
      • Southeast
        • Disney Wilderness Preserve (DSNY)
        • Talladega National Forest (TALL)
        • Duke Forest (DUKE)
        • Callaway Forest Preserve (CALL)
        • Green Swamp (GRSW)
        • Croatan National Forest (CROA)
        • Coweeta (CWT)
        • Great Smoky Mountains National Park (GSNP)
        • Mars Hill (MARS)
        • Mountain Lake Biological Station (MLBS)
        • Smithsonian Conservation Biology Institute (SCBI)
      • mid Atlantic and Northeast
        • Smithsonian Environmental Research Center – SERC
        • Harvard Forest (HARV)
        • Bartlett Forest (BART)
        • Comstock Point
        • Western Quebec
      • Midwest
        • Treehaven – TREE
        • University of Notre Dame Environmental Research Center (UNDE)
      • Rocky Mountains
        • Yellowstone (YELL)
        • Niwot Ridge (NIWO)
      • Pacific Northwest
        • Wind River Experimental Forest (WREF)
        • Mount Ranier (MORA)
        • Franklin Network
      • Southwest
        • Soaproot Saddle (SOAP)
        • Sequoia (SEQU)
        • Hastings Natural History Reservation (HNHR)
      • Alaska
        • Bonanza Creek (BONA)
    • Long-term forest demography
  • Publications
  • R, python
    • geedataextract
    • gjam
    • mastif
  • Courses
    • Ecological diversity and climate change (ENV 623L, Fall 2018)

Clark Lab

Biodiversity and Global change

R, python

R, python

geedataextract –  utilities to extract variables from google earth engine written by Amanda Schwantes.  geedataextract is written in python.

 

gjam – generalized joint attribute modeling for multivariate responses on multiple scales was written by Jim Clark, with a fine dimension reduction component by Daniel Taylor-Rodriguez. gjam is on CRAN for use in R.

 

mastif – mast inference and forecasting for inference and prediction on mast production by trees, writing by Jim Clark. mastif is on CRAN for use in R.

Recent Posts

  • Alumni news: Kai Zhu wins Tansley Medal
  • today in PNAS: The emergent interactions that govern biodiversity change
  • today: Restore Science-Based Policy in Government
  • NASA Fosters Innovative Ways to Understand Biodiversity
  • Renata is Graduate Student of the Year AND “Willing and Abele” Student of the Year
  • Ethan graduates with distinction
  • today in Geophys Research Letters: Heterogeneity and the continental distribution of species
  • Becky awarded NSF Graduate Research Fellowship
  • Renata recieves ESA Katherine S. McCarter Award
  • People and Nature
  • ESA presentations 2020
  • most cited articles in 2019
  • New postdocs in the lab
  • Australian wildfires in Popular Science
  • Renata, Graduate Leader in Socio-Environmental Synthesis
  • President Macron and MOPGA
  • Madrid climate march
  • Nature and People
  • Christian Science Monitor
  • droughtEye in the news

More Posts

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